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Full services directory How it worksFor prosAbout Get matched Call (866) 582-8523Water around a skylight comes from four different places and only one of them is the skylight. Getting that right is the whole job — the wrong diagnosis here is how people end up buying a new unit that leaks in exactly the same spot.
Almost all skylight repair is leak repair, and the first job is deciding which of four things is at fault: the flashing around the unit, the seal at the glazing edge, the roof covering upslope of the skylight, or condensation forming inside the light shaft. They look identical from the ceiling and they are four different repairs at four different prices. A competent repair starts on the roof and in the attic, not with a quote.
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Separate condensation from water ingress before anything else
The question that decides the whole job: does it happen when it rains, or when it is cold? Water on the inside face of the glass in cold weather, with no correlation to rainfall, is household moisture condensing on the coldest surface in the room. The fix is ventilation, humidity and shaft air sealing — not roofing.
Watch for: Any contractor who quotes for reflashing without asking when it happens. It is the first question, and if it is not asked you are paying for roof work to solve a humidity problem.
Trace the water on the roof and from inside the attic
Where there is real ingress, it is traced from above and below — checking the head flashing and the courses above it, the step flashing up the sides, the sill, the curb if there is one, and the deck around the opening from the attic side, where staining shows the true entry point rather than the exit point.
Watch for: A diagnosis made from the ceiling stain alone. Water enters high and travels down rafters and along the shaft before it appears, so the visible mark is frequently nowhere near the hole.
Repair the flashing properly, or reflash completely
Where the flashing is the fault, the honest repair is usually to strip it back and install a complete new manufacturer kit for the unit and the covering, rather than to patch a piece. Partial repairs to interleaved flashing rarely hold, because the failure is normally the sequence rather than one component.
Watch for: A repair delivered as a bead of sealant around the frame. Sealant has a service life of a few years against flashing's decades — it is a deferral, and it makes the eventual proper repair harder because the old material has to come off first.
Deal with the glazing seal, or accept that it is a replacement
Moisture trapped between the panes of a sealed glazing unit means the seal has gone. That is not repairable in place on most residential skylights; the glazing unit or the whole skylight is replaced. The exterior gasket where the glass meets the frame is a different component and can often be renewed.
Watch for: Being told a failed sealed unit can be "dried out" or drilled and vented. It restores neither the appearance nor the insulating performance you paid for.
Dry, repair and finish the inside
Anything wet inside the shaft — insulation especially — is removed rather than covered. Wet insulation in a closed cavity does not dry, and the staining and smell return. Then the drywall, trim and paint are made good.
Watch for: New drywall going over insulation that is still damp. Ask to see the cavity before it is closed up, or ask for a photograph.
Small repairs — resealing a gasket, freeing an operator, clearing a blocked weep channel — are commonly a short call-out. A full reflash sits well above that, and a failed sealed glazing unit generally means replacing the skylight. See the skylight cost guide for current ranges.
See the full skylight repair cost guide — by material, size and region →
Everyone else ranking for this is paid when you say yes. Here's when you shouldn't.
Do not go up to investigate a skylight leak on a wet, steep or high roof. Falls are what actually injure people doing this, and the pull to go and look is strongest in exactly the conditions that make it most dangerous — during or right after the rain that revealed the leak.
Did it start with rain, or with cold weather?
Ask this of yourself before you call anyone, and expect the contractor to ask it too. If they do not, they are not diagnosing — and condensation is a large share of reported skylight leaks.
Will you inspect from the attic as well as from the roof?
The entry point is usually higher than the stain. The attic side is where staining on the deck shows where the water is really coming in.
Have you checked the roof covering above the skylight?
The skylight interrupts water flowing down the slope, so a failure upslope shows up at the skylight. Missing this is why some units get reflashed twice.
Is this a patch or a complete reflash, and what is the difference in price and expected life?
Both can be legitimate — a patch to get through to a roof replacement, a full reflash otherwise. What you want is to be told which one you are buying.
Is there wet insulation in the shaft, and will you remove it?
Wet insulation sealed inside a cavity does not dry, and it comes back as staining and smell. This is the part most likely to be skipped because nobody sees it.
What warranty comes with the repair itself?
Leak repairs are where warranties are vaguest. A specific written term on the workmanship tells you how confident they are in the diagnosis.
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